Whole-genome sequence of Pseudomonas yamanorum OLsAu1 isolated from the edible wild ectomycorrhizal mushroom Lactarius sp. section Deliciosi.

We announce the genome sequencing, assembly, and annotation of the OLsAu1 strain and its taxonomic assignment to Pseudomonas yamanorum. The isolate comes from a wild edible ectomycorrhizal Lactarius sp. mushroom in the Abies forest. There is information regarding the strain's ability to promote plant growth, indicating its potential application in forestry.

IMPACT OF CRUDE OIL ON FUNCTIONAL GROUPS OF CULTURABLE BACTERIA AND COLONIZATION OF SYMBIOTIC MICROORGANISMS IN THE Clitoria-Brachiaria RHIZOSPHERE GROWN IN MESOCOSMS / Impacto del petróleo crudo sobre grupos funcionales de bacterias cultivables y colonización de microorganismos simbióticos en la rizosfera de Clitoria-Brachiaria crecidas en mesocosmos

ABSTRACT This research evaluated the changes on populations of culturable N-fixing free bacteria (NFFB) and P-solubilizing bacteria (PSB), as well as on the root nodulation by native rhizobia, the root colonization and spore number of arbuscular mycorrhizal fungi (AMF), in the rhizosphere of Clitoria ternatea and Brachiaria brizantha grown in mesocosms contaminated with crude oil (0, 3000, 6000, 9000, and 12000 mg kg-1), for 240 days. After 24 h of soil contamination, the highest populations of NFFB and PSB (5.5 and 4.9 LogUFC, respectively) were found in control, and the lowest populations were obtained at 12000 mg kg-1 (5.1 and 4.2 LogUFC, respectively). In contrast, at 60 and 240 days, the control showed lower populations of NFFB and PSB (5.4 and 4.8 LogUFC, respectively) than contaminated treatments. The highest number of root nodules in C. ternatea was quantified in control at 60 and 240 days (25 and 27 nodules, respectively) in comparison to those observed at the treatment with 12000 mg kg-1 (7 and 1 nodule, respectively). At 60 days, AMF colonization in both plant species, and the number of spores significantly decreased as the crude oil concentration increased; however, at 240 days, the highest number of AMF spores was recorded at treatments with 6000 and 12000 mg kg-1. The dry weight of both plant species significantly decreased as crude oil concentrations increased. Although C. ternatea was more susceptible to the toxic effects of crude oil, this plant species showed greater content of total chlorophyll than B. brizantha.

RESUMEN Esta investigación evaluó los cambios en la población cultivable de bacterias de vida libre fijadoras de nitrógeno (BVLFN) y de bacterias solubilizadoras de fósforo (BSP), así como en la nodulación de raíces por rizobios nativos, y en la colonización y número de esporas de hongos micorrízicos arbusculares (HMA) en la rizósfera de Clitoria ternatea y Brachiaria brizantha cultivadas en mesocosmos contaminados con petróleo crudo (0, 3000, 6000, 9000 y 12000 mg kg-1), durante 240 días. A las 24 h de la contaminación del suelo, las poblaciones más altas de BVLFN y BSP (5,5 y 4,9 LogUFC, respectivamente) se encontraron en el control, mientras que las poblaciones más bajas se obtuvieron a 12000 mg kg-1 (5,1 y 4,2 LogUFC, respectivamente). En contraste, a los 60 y 240 días, el control mostró bajas poblaciones de BVLFN y BSP (5,4 y 4,8 LogUFC, respectivamente) que los tratamientos contaminados. El mayor número de nódulos en raíz de C. ternatea se cuantificó en el control a los 60 y 240 días (25 y 27 nódulos, respectivamente) en comparación con el tratamiento con 12000 mg kg-1 (7 y 1 nódulos, respectivamente). A los 60 días, la colonización de HMA en ambas especies vegetales y el número de esporas disminuyeron significativamente al aumentar la concentración de petróleo crudo; sin embargo, a los 240 días, se registró el mayor número de esporas de HMA en los tratamientos con 6000 y 12000 mg kg-1. El peso seco vegetal disminuyó significativamente al aumentar las concentraciones de petróleo crudo. Clitoria ternatea fue más susceptible a la toxicidad del petróleo, aunque esta especie vegetal mostró mayor contenido de clorofila total que B. brizantha.

Respuesta de Fragaria mexicana y comunidades microbianas rizosféricas al aumento de temperature / Response of Fragaria Mexicana and rhizophere microbial communitites to temperature increase

Resumen Para los próximos 100 años se pronostica un incremento en la temperatura del planeta de casi 4 °C, lo cual pondrá en riesgo las especies que no logren adaptarse. En esta investigación se determinaron las respuestas morfofisiológicas de F. mexicana y los cambios en la población de bacterias fijadoras de nitrógeno atmosférico (BFN) asociadas a sus raíces, debido a dos condiciones ambientales con diferencias medias de temperatura de 5.1 oC: invernadero (temperatura alta, TA) y campo abierto (temperatura baja, TB); y con cuatro tratamientos: sin inocular (T), inoculadas con la cepa ocho (CP8), cepa cuatro (CP4) y con ambas cepas (CP8 + 4). Las BFN fueron aisladas de la rizosfera de F. mexicana y transformadas genéticamente con reporteros, para cuantificar la población al final del experimento. Se midió el peso seco de la parte aérea y la raíz, la tasa de asimilación de CO2 (A), el inicio de la floración, el número de flores y frutos; y la persistencia de las bacterias fijadoras de N atmosférico (BFN). Además, se evaluó la concentración de NO3, NH4, P y materia orgánica (MO) en el sustrato, al inicio y final del experimento. Las plantas sometidas a alta temperatura presentaron mayor peso seco de la parte aérea y fotosíntesis; con una disminución en el peso seco de la raíz, y en el número de flores y frutos. La MO en el sustrato disminuyó, mientras que la disponibilidad de NO3, NH4 y P aumentó. El incremento de temperatura y la mayor presencia de N en el substrato provocaron reducción en la población de BFN. Estos resultados sugieren que temperaturas altas estimulan el crecimiento de F. mexicana y tienen un impacto negativo sobre su reproducción y en las BFN asociadas a sus raíces.(AU)

Abstract The earth could experience a warming of 4 °C in the next one hundred years. This would put at risk the plants that can´t adapt. Fragaria mexicana is an endemic plant of temperate forest of Mexico. The response of this wild strawberry to temperature increasing has not been studied and could play an important role for event of global warming. This study determinate the morphological and physiological responses of F. mexicana and changes in the N2-fixing bacteria (BFN) population on its roots, due to two environmental conditions with differences of temperature 5.1 °C: greenhouse (high temperature, TA) and open land (low temperature, TB); and with four free-living nitrogen-fixing bacteria (BFN) treatments: non-inoculated (T), inoculated with strain eight (CP8), strain four (CP4), and strains eight and four mixed (CP8 + 4). BFN were isolated from the rhizosphere of F. mexicana and were genetically transformed with reporters to quantify the population at the end of the experiment. NO3, NH4 and P and organic matter (MO) in the substrate were determined at beginning and finish of the experiment. Shoot and root dry weight, photosynthetic rate, flowering and fructification starting, flowers and fruits number, were measured. Shoot dry weight and photosynthetic rate were lower in TB than TA, decreasing 3.1 g and 0.94 µmol m-2 s-1, respectively. Root dry weight was 3.0 g less in TA compared with TB. Number flowers decrease in 40.89 % and number fruits in 38.11 % on TA than TB. F. mexicana plants start flowering 14 days previously in TB than TA. MO in the substrate decrease in TA, while the concentration of NO3, NH4 and P, increased. Population of BFN was lower in TA. Results obtained indicated that higher temperature promotes the growth of F. mexicana and reduce its reproduction and BNF population associated with its roots.(AU)

[Growth and photochemical efficiency of photosystem ii in seedlings of two varieties of Capsicum annuum L. inoculated with rhizobacteria and arbuscular mycorrhizal fungi]. / Crecimiento y eficiencia fotoquímica del fotosistema ii en plántulas de 2 variedades de Capsicum annuum L. inoculadas con rizobacterias u hongos micorrícicos arbusculares.

Plant growth promoting rhizobacteria (PGPR) and arbuscular mycorrhizal fungi (AMF) are a biological alternative for the sustainable management of Capsicum annuum L. This research work evaluated the effects of both PGPR and AMF on bell pepper and jalapeno pepper plants. Five bacterial strains isolated from several locations in Estado de Mexico were used: [P61 (Pseudomonas tolaasii), A46 (P. tolaasii), R44 (Bacillus pumilus), BSP1.1 (Paenibacillus sp.), and OLs-Sf5 (Pseudomonas sp.)], and three treatments with AMF [H1 (consortium isolated from pepper crops in the State of Puebla), H2 (Rhizophagus intraradices), and H3 (consortium isolated from the rhizosphere of lemon trees, State of Tabasco)]. In addition, a fertilized treatment (Steiner nutrient solution at 25%) and an unfertilized control were included. Seedlings of "Caloro" jalapeno pepper and "California Wonder" bell pepper were inoculated with AMF at seed sowing, and PGPR were inoculated after 15 days of seedling emergence; seedlings were grown under plant growth chamber conditions. P61 bacterium and H1 AMF consortia were the most effective microorganisms for jalapeno pepper whereas R44 bacterium and AMF H3 and H1 were the most effective for bell peppers, when compared to the unfertilized control. Furthermore, P61 and R44 bacteria showed beneficial effects on PSII efficiency.

[Casuarina equisetifolia (Casuarinaceae) growth in soil with diesel and application of biostimulation and bioaugmentation]. / Crecimiento de Casuarina equisetifolia (Casuarinaceae) en suelo con diésel, y aplicación de bioestimulación y bioaumentación.

Phytoremediation is an ecologically sound biotechnology directed to cleaning up contaminated soils. The study of tree species to treat petroleum contaminated soils is scarce; moreover, the combination of phytoremediation with bioaugmentation and biostimulation processes is also limited. Thus, this work evaluated the effects of the inoculation of Glomus intraradices, a bacterial consortium (M2BOS1-R2 and M2BOSI-F4) and Trichoderma viride, on the growth of Casuarina equisetifolia, fertilized with Floranid or Triple 17, when sown in a diesel-contaminated soil (7 500mg/kg). The factorial experiment 2x5x3 included 30 treatments with 10 replicates in a completely randomized design under greenhouse conditions for 120 days. Diesel significantly diminished plant height, total biomass, and plant index quality (PIQ). Glomus or bacterial consortium significantly increased plant height, total biomass and PIQ when compared to the inoculation of the three microorganisms or to the control. Floranid had negative effects on plant growth and PIQ at diesel contamination. Fertilization with Triple 17 combined with the three microorganisms stimulated plant growth in the absence of diesel, whereas in the presence of this contaminant the treatments combining Triple 17 with the bacterial consortium or with Trichoderma had better plant growth and PIQ. Mycorrhizal colonization was inhibited due to diesel contamination, and especially when Floranid was applied. The fertilizer Triple 17 (biostimulation) combined with the beneficial microorganisms (bioaugmentation) improved growth responses of C. equisetifolia in diesel-contaminated soil.

Crecimiento de Casuarina equisetifolia (Casuarinaceae) en suelo con diésel, y aplicación de bioestimulación y bioaumentación / Casuarina equisetifolia (Casuarinaceae) growth in soil with diesel and application of biostimulation and bioaugmentation

Phytoremediation is an ecologically sound biotechnology directed to cleaning up contaminated soils. The study of tree species to treat petroleum contaminated soils is scarce; moreover, the combination of phytoremediation with bioaugmentation and biostimulation processes is also limited. Thus, this work evaluated the effects of the inoculation of Glomus intraradices, a bacterial consortium (M2BOS1-R2 and M2BOSI-F4) and Trichoderma viride, on the growth of Casuarina equisetifolia, fertilized with Floranid® or Triple 17, when sown in a diesel-contaminated soil (7 500mg/kg). The factorial experiment 2x5x3 included 30 treatments with 10 replicates in a completely randomized design under greenhouse conditions for 120 days. Diesel significantly diminished plant height, total biomass, and plant index quality (PIQ). Glomus or bacterial consortium significantly increased plant height, total biomass and PIQ when compared to the inoculation of the three microorganisms or to the control. Floranid had negative effects on plant growth and PIQ at diesel contamination. Fertilization with Triple 17 combined with the three microorganisms stimulated plant growth in the absence of diesel, whereas in the presence of this contaminant the treatments combining Triple 17 with the bacterial consortium or with Trichoderma had better plant growth and PIQ. Mycorrhizal colonization was inhibited due to diesel contamination, and especially when Floranid was applied. The fertilizer Triple 17 (biostimulation) combined with the beneficial microorganisms (bioaugmentation) improved growth responses of C. equisetifolia in diesel-contaminated soil.

La fitorremediación es una biotecnología ecológicamente racional que está dirigida a la limpieza de suelos contaminados; sin embargo, el estudio de especies arbóreas para la fitorremediación de suelos con hidrocarburos del petróleo es limitado. Más aún, la combinación de la fitorremediación con procesos de bioaumentación y bioestimulación es también limitada. Por lo anterior, este estudio evaluó el efecto de la inoculación de Glomus intraradices, un consorcio bacteriano (M2BOS1-R2 y M2BOSI-F4) y Trichoderma viride en el crecimiento de plantas de Casuarina equisetifolia L. fertilizadas con Floranid® o Triple 17, en suelo contaminado con diésel (7 500mg/kg). El experimento factorial 2x5x3 incluyó 30 tratamientos y 10 repeticiones, distribuidos completamente al azar en invernadero, durante 120 días. El diésel disminuyó significativamente la altura, la biomasa total y el índice de calidad (ICP) de planta. Glomus o las bacterias aumentaron significativamente la altura, la biomasa seca total y el ICP con respecto al tratamiento sin inocular o con la triple inoculación. El Floranid redujo el crecimiento vegetal y el ICP, en presencia de diésel. El Triple 17 combinado con los tres microorganismos produjo mayor crecimiento vegetal en ausencia de contaminación, pero en presencia de diésel, el Triple 17 combinado con bacterias o con Trichoderma, estimuló la biomasa seca total y el ICP. La colonización micorrízica fue inhibida por el diesel, especialmente con la fertilización del Floranid. El Triple 17 (bioestimulación) combinado con los microorganismos (bioaumentación), favoreció el crecimiento de Casuarina en suelo contaminado con diésel.